CCP4 Updates

Updates Summary

Update ID: 6.5.001
Date: 24.12.14

Component Description Mac OS X 64-bitLinux 32-bitLinux 64-bitWindows
acedrgadded ccp4i task interfaceyesyesyesyes
further improvementsyesyesyesyes
amplefixed executable pathyesyesyesyes
ccp4-basefixed setup script to unset unnecessary system variablesyesyesyesyes
ccp4iadded acedrgyesyesyesyes
ccp4-progsin pdbcur, added options to remove chain, TER record etcyesyesyesyes
crank2fixed interaction with pdbcuryesyesyesyes
documentationupdated for pdbcur and privateeryesyesyesyes
libccp4fixed ccp4 versioning, which, in particular, affected privateeryesyesyesyes
privateerminor changes for i2yesyesyesyes
xia2fixed -3d optionyesyesyes-

Update ID: 6.5.002
Date: 22.01.15

Component Description Mac OS X 64-bitLinux 32-bitLinux 64-bitWindows
crank2several bug fixes, mainly related to the graphical interface and Crunch2yesyesyesyes
clipper-progsctruncate - fixes for issue with twinning alpha calculationyesyesyesyes
cmapcoeff - fix for issues with anomalous calculationyesyesyesyes
phaserphaser 2.5.7 - update to 2.5.7yesyesyesyes
blendFixed a bug in keywords management; now accepting both uppercase and lowercase. Fixed a bug for the calculation of aLCV.yesyesyesyes
privateerMinor bugfixesyesyesyesyes
monomersSeveral bug-fixes and addition of new compoundsyesyesyesyes
ccp4-progszanuda: adjustments to changes in refmac output pdb-file; bypass for P1 refinement failureyesyesyesyes
ccp4iMrSHELXE: temporarily switched off pdb- and mtz-files crosscheckyesyesyesyes
Fix for handling Protein/DNA complex sequences in Matthews interfaceyesyesyesyes
documentationMinor fixesyesyesyesyes
mrbumpFix for sftools path length problem and Mac fix for MAFFTyesyesyesyes

Reporting bugs

All bugs should be reported to ccp4@stfc.ac.uk.