CCP4 Workshop

 

Osaka, Japan

 

27 Nov. 2006 1 Dec. 2006

 

General Structure:

 

Mornings

Lectures (9am-1pm)

Afternoon

Tutorials (2:30pm-6:00pm)

Evening

Problem Solving (7:30pm-...)

 

Tutors:

G. Murshudov (York)

K. Cowtan (York)

P. Emsley (York)

P. Evans (MRC-LMB)

C. Ballard (Daresbury)

S. Cohen (NKI)

A. Nakagawa (Osaka)

R. Steiner (Imperial College)

E. Krissinel (EBI)

R. Pannu (Leiden)

T. Kosada (Osaka/PDBj)

 

Timetable:

 

Mon

27 Nov.

Data processing

 

1a. Introduction and Welcome

 

 

1b. Data Processing using MOSFLM

 

P. Evans

 

1c. SPRING8

A.Nakagawa

 

Coffee

 

 

1d. Scaling and Merging

P. Evans

 

1e. Data Quality

P. Evans

 

Lunch

 

 

Tutorial:

MOSFLM, SCALA, TRUNCATE

 

Tue

28 Nov.

Experimental Phasing

 

2a. Theory of Maximum Likelihood

K. Cowtan

 

2b. Theory of Experimental Phasing

R. Pannu

 

Coffee

 

 

2c. Phasing in CCP4 (mlphare, bp3, crank)

R. Pannu

 

2d. Density Modification

K.Cowtan

 

Lunch

 

 

2e. Shelxd

P. Emsley

 

Tutorial:

Experimental phasing and density modification

 

Wed

29 Nov.

Molecular Replacement

 

3a. Molrep

G.Murshudov

 

3b. Phaser-MR

 

 

Coffee

 

 

3c. BALBES

G. Murshudov

 

3d. Mr BUMP

C. Ballard

 

Lunch

 

 

Tutorial:

Molecular Replacement: MOLREP, Phaser and pipelines

 

Thursday

30 Nov.

Refinement and building

 

4a. Refinement

G.Murshudov

 

4b. Refmac

R. Steiner

 

Coffee

 

 

4c. Arp/Warp

S. Cohen

 

4d. Coot model completion

P. Emsley

 

Lunch

 

 

Tutorial:

Refinement and building: REFMAC, ARP/WARP, COOT

 

Friday

1 Dec.

Model Validation

 

5a. Validation in Coot

P.Emsley

 

5b. Deposition Japan

T. Kosada

 

Coffee

 

 

5c. SSM

E. Krissinel

 

5d. PISA

E. Krissinel

 

Tutorial:

PISA, SSM