Collaborative Computational Project No. 4
Software for Macromolecular X-Ray Crystallography

CCP4 Projects

This page gives links to various projects that CCP4 is involved in, indicating the breadth of CCP4 activities.


[ Core Projects ] [ Grants and Collaborations ] [ Related/Contributed Software ]

Core Projects

COOT Graphical model building coot homepage
CCP4i CCP4 Graphical User Interface http://www.ccp4.ac.uk/ccp4i_main.php
CCP4MG CCP4 Molecular Graphics Project http://www.ccp4.ac.uk/MG/
MrBUMP Automated Molecular Replacement http://www.ccp4.ac.uk/MrBUMP/
PISA Protein Interfaces, Surfaces and Assemblies http://www.ebi.ac.uk/msd-srv/prot_int/pistart.html
MOSFLM GUI Building a modern interface to MOSFLM http://www.mrc-lmb.cam.ac.uk/harry/imosflm/index.html
Gemmi General MacroMolecular I/O project-gemmi.github.io

Grants and Collaborations

Ongoing

DIALS Diffraction Integration for Advanced Light Sources http://dials.sourceforge.net/
PiMS Protein Information Management System project http://www.pims-lims.org/
Cyttron II Development of bioimaging technologies http://www.cyttron.org/
Instruct Integrated access to structural biology technology and methodologies http://www.structuralbiology.eu/
Dimple Pipeline for refinement and ligand screening http://ccp4.github.io/dimple/
BioStruct-X Support access for key methods in structural biology http://www.biostruct-x.eu/

Selected completed grants

Related and Contributed Software Projects

CCP-EM Collaborative Computational Project for Electron cryo-Microscopy http://www.ccpem.ac.uk/
John Campbell John Campbell's Java Based Software including PXImage and PXSim http://www.ccp4.ac.uk/jwc/Xhtml/CCP4/ccp4_jwc_top.html
AMPLE Ab initio modelling for Molecular Replacement http://www.ccp4.ac.uk/ample/
Refmac Garib Murshudov's Maximum Likelihood Macromolecular Refinement Program http://www2.mrc-lmb.cam.ac.uk/groups/murshudov/
MOLREP & SFCHECK Alexei Vagin's software for Molecular Replacement and for assessing reflection data quality http://www.ysbl.york.ac.uk/~alexei/
Mosflm Integration software for single crystal diffraction data from area detectors http://www.mrc-lmb.cam.ac.uk/harry/mosflm/
Phaser Randy Read group's program for phasing macromolecular crystal structures using Maximum Likelihood method http://www-structmed.cimr.cam.ac.uk/phaser/
Coot Paul Emsley's Graphical Model Building Program http://www.biop.ox.ac.uk/coot/
WinCoot Bernhard Lohkamp's page for the Windows version of Coot http://www.ysbl.york.ac.uk/~lohkamp/coot/wincoot.html
Clipper Kevin Cowtan's crystallographic libraries and applications http://www.ysbl.york.ac.uk/~cowtan/
PDBExtract RCSB software for preparing data for submission to the PDB http://sw-tools.pdb.org/apps/PDB_EXTRACT/index.html
CHOOCH Gwyndaf Evans' program for analysing fluorescence spectra http://www.gwyndafevans.co.uk/
XIA2 Graeme Winter's tools for automating macromolecular crystallographic data reduction http://www.ccp4.ac.uk/xia
UglyMol Web-based molecular viewer mimicking Coot https://uglymol.github.io/

If you feel that the information on this page is inaccurate, or if something is missing, then please contact CCP4 at ccp4@ccp4.ac.uk.